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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001411.1_7479_7607_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

7479 - 7607

Intron Length:

129

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

GGTGGCAAGAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

GTGGCAAGAAAG

Flanking Amino Acid:

LFANYGGAEAGGKKKGSSFQ

Intron Amino Acid Position:

462

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

1.2

87.9

29.3

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

44.5

-0.3

1.2

34.5

39.4

Minor 5ss

41.5

-0.9

2.9

58.8

45.7

Minor BPS

37.8

-1

40.93

42.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000011970

Chromosome:

PEDO01001411.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008943

52 - 19059

19008