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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001418.1_2227_2412_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2227 - 2412

Intron Length:

186

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGAACC

5'SS Class:

strong_major

3'SS Sequence:

CGGTGCCTTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGTTCAT

U12 Branch Point Sequence:

TCACCCTGACCC

Flanking Amino Acid:

KLELDEKRRKRWDIQRIREQ

Intron Amino Acid Position:

204

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.8

0.75

72.5

37.3

Major BPS

0.42

1.4

71.4

45.1

Major PPT

69.1

0.43

43.1

Minor 5ss

33.3

-1.9

3.1

43.9

43.5

Minor BPS

50.6

-0

1.8

61.78

43.1

Associated Gene:

Gene:

MSL1

Ensembl Gene ID:

ENSAPLG00000012269

Chromosome:

PEDO01001418.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037574

29 - 2932

2904

ENSAPLT00000023707

8 - 2932

2925

ENSAPLT00000012773

485 - 2932

2448

ENSAPLT00000048462

8 - 2932

2925