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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001418.1_992_1943_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

992 - 1943

Intron Length:

952

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTAAGCGAT

5'SS Class:

strong_major

3'SS Sequence:

CCCCCTCCTGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GGTTAAT

U12 Branch Point Sequence:

ATGGCCAAACCT

Flanking Amino Acid:

PSPKKEETVAIPSWRDHVVE

Intron Amino Acid Position:

243

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.3

0.71

75.1

35.1

Major BPS

66.6

0.41

1.4

69.7

44.2

Major PPT

0.56

0.7

68.4

25.2

Minor 5ss

39.7

-1.2

3.5

55.6

43.2

Minor BPS

43.1

-0.4

2.2

62.72

47.2

Associated Gene:

Gene:

MSL1

Ensembl Gene ID:

ENSAPLG00000012269

Chromosome:

PEDO01001418.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023707

8 - 2932

2925