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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001418.1_996_1230_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

996 - 1230

Intron Length:

235

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TAA|GCGATGGAG

5'SS Class:

weak_major

3'SS Sequence:

TGGAGCCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCCCAA

U12 Branch Point Sequence:

TGTCCTTGGAGC

Flanking Amino Acid:

SPKKEETVASKGFWPCLAPF

Intron Amino Acid Position:

142

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.9

0.21

1.3

53.5

41.4

Major BPS

45.3

-0.2

1.2

35.2

Major PPT

67.1

0.39

58.4

42.9

Minor 5ss

14.6

-4.1

3.7

19.5

30.8

Minor BPS

47.9

-0.1

1.8

60.68

38.6

Associated Gene:

Gene:

MSL1

Ensembl Gene ID:

ENSAPLG00000012269

Chromosome:

PEDO01001418.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048462

8 - 2932

2925

ENSAPLT00000037574

29 - 2932

2904

ENSAPLT00000012773

485 - 2932

2448