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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001432.1_1017_1111_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1017 - 1111

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTGAGTCCA

5'SS Class:

major

3'SS Sequence:

GCGTAATCCGCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGCCAA

U12 Branch Point Sequence:

GTTTTGCCAACC

Flanking Amino Acid:

TRVAFRGSDEIFCRVYMPDH

Intron Amino Acid Position:

272

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.2

0.48

61.4

39.2

Major BPS

0.07

1.4

64.5

42.8

Major PPT

62.5

0.28

54.6

40.1

Minor 5ss

30.3

-2.3

2.8

30.2

36.1

Minor BPS

44.6

-0.4

2.4

63.86

41.4

Associated Gene:

Gene:

RAPGEFL1

Ensembl Gene ID:

ENSAPLG00000010572

Chromosome:

PEDO01001432.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010995

16 - 3234

3219