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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001432.1_107_196_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

107 - 196

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTGAGGGGT

5'SS Class:

major

3'SS Sequence:

GTCCCCCCCCCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTCAC

U12 Branch Point Sequence:

CGGGTCTCACCC

Flanking Amino Acid:

LLKKLIKIAAICKQNQDMLS

Intron Amino Acid Position:

461

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

1.1

65.9

39.7

Major BPS

67.3

0.43

1.2

71.3

36.7

Major PPT

0.41

0.8

58.1

33.2

Minor 5ss

27.9

-2.5

3.6

41.9

45.3

Minor BPS

42.8

-0.5

1.8

46.12

43.1

Associated Gene:

Gene:

RAPGEFL1

Ensembl Gene ID:

ENSAPLG00000010572

Chromosome:

PEDO01001432.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010995

16 - 3234

3219