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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001432.1_1225_1845_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1225 - 1845

Intron Length:

621

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTGGG

5'SS Class:

major

3'SS Sequence:

CGCGATGCCGCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CACCCAT

U12 Branch Point Sequence:

GGGTGCTGAGCC

Flanking Amino Acid:

LHQLVETVELKVADETPPPS

Intron Amino Acid Position:

234

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

40.1

Major BPS

52.1

0.05

1.2

62.1

35.8

Major PPT

57.6

0.17

49.4

Minor 5ss

28.4

-2.5

3.1

31.4

36.6

Minor BPS

44.5

-0.4

2.1

53.03

Associated Gene:

Gene:

RAPGEFL1

Ensembl Gene ID:

ENSAPLG00000010572

Chromosome:

PEDO01001432.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010995

16 - 3234

3219