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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001432.1_1944_2022_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1944 - 2022

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGGGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TGCTCCCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTGAG

U12 Branch Point Sequence:

GCCCCCTGAGCC

Flanking Amino Acid:

EEESAGKVIKELYLLIMKDT

Intron Amino Acid Position:

202

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.3

0.76

0.9

74.9

35.3

Major BPS

-0.1

1.5

42.6

40.4

Major PPT

71.4

0.48

0.8

62.1

34.7

Minor 5ss

28.5

-2.5

3.4

40.8

45.6

Minor BPS

47.7

-0.1

1.7

53.68

43.6

Associated Gene:

Gene:

RAPGEFL1

Ensembl Gene ID:

ENSAPLG00000010572

Chromosome:

PEDO01001432.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010995

16 - 3234

3219