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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001432.1_2134_2622_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2134 - 2622

Intron Length:

489

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAC|GTGGGGGGG

5'SS Class:

weak_major

3'SS Sequence:

GGCGTGCTGGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GCGGCAG

U12 Branch Point Sequence:

CGGGCGGCAGCC

Flanking Amino Acid:

HQQYPWGGGDEGAGLRRKRA

Intron Amino Acid Position:

165

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.14

1.4

45.7

44.4

Major BPS

32.5

-1.1

1.6

30.7

Major PPT

43.9

-0.3

1.7

42.1

43.2

Minor 5ss

23.2

-3.1

3.5

26.5

37.8

Minor BPS

29.4

-1.5

2.4

34.46

41.5

Associated Gene:

Gene:

RAPGEFL1

Ensembl Gene ID:

ENSAPLG00000010572

Chromosome:

PEDO01001432.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010995

16 - 3234

3219