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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001441.1_2451_2559_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

2451 - 2559

Intron Length:

109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTACCGGCC

5'SS Class:

weak_major

3'SS Sequence:

GCTTCTCCCCAAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTAAC

U12 Branch Point Sequence:

GCCCTCCTAACC

Flanking Amino Acid:

KKGFEATHSTVCGGQMRAEV

Intron Amino Acid Position:

641

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.2

0.15

1.3

51.5

41.4

Major BPS

0.55

71.8

31.4

Major PPT

63.1

0.29

60.4

35.7

Minor 5ss

35.4

-1.7

3.7

50.7

46.1

Minor BPS

49.5

-0

1.7

56.77

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017696

Chromosome:

PEDO01001441.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034334

1493 - 8830

7338