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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001441.1_5267_6129_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

5267 - 6129

Intron Length:

863

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAGCCC

5'SS Class:

major

3'SS Sequence:

GATTAAAACCAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

TCTGCTTTATTT

Flanking Amino Acid:

QEGLQSPFFLRQTRLAQISG

Intron Amino Acid Position:

602

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.2

0.43

1.1

57.2

38.5

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

47.9

-0.1

1.1

41.8

Minor 5ss

-2.3

3.5

42.1

44.9

Minor BPS

59.4

0.37

1.7

74.81

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017696

Chromosome:

PEDO01001441.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044954

2967 - 8830

5864

ENSAPLT00000026097

4298 - 8830

4533