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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001441.1_8563_8616_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

8563 - 8616

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GCA|GCAAATTTG

5'SS Class:

weak_major

3'SS Sequence:

CTAATTAAACCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

TGCTAATTAAAC

Flanking Amino Acid:

HVDDLAGGRS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.7

0.16

1.4

58.9

45.8

Major BPS

73.8

0.59

0.9

26.8

Major PPT

60.2

0.23

1.1

52.9

44.7

Minor 5ss

-1.7

4.1

54.2

44.2

Minor BPS

49.8

-0

1.9

63.08

41.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017696

Chromosome:

PEDO01001441.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022942

2967 - 8618

5652