Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001475.1_1431_1952_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1431 - 1952

Intron Length:

522

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCG|GTAGGGTCC

5'SS Class:

major

3'SS Sequence:

CCTTCTCCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTCTGAC

U12 Branch Point Sequence:

GGGGTCTGACCG

Flanking Amino Acid:

QFPLTCETGPGSPSGHAMGA

Intron Amino Acid Position:

114

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.4

0.48

1.1

58.7

41.4

Major BPS

63.7

0.34

1.2

41.8

Major PPT

77.4

0.62

0.7

69.1

31.5

Minor 5ss

37.1

-1.5

3.5

51.1

45.7

Minor BPS

42.4

-0.7

1.8

40.99

43.2

Associated Gene:

Gene:

G6PC

Ensembl Gene ID:

ENSAPLG00000017120

Chromosome:

PEDO01001475.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037211

21 - 2880

2860