Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001475.1_2063_2650_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2063 - 2650

Intron Length:

588

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTAGC

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAATAAC

U12 Branch Point Sequence:

CCACCCCAAACC

Flanking Amino Acid:

IGDWLNLVFKWILFGERPYW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.7

0.79

0.9

36.6

Major BPS

52.4

0.06

1.2

37.3

Major PPT

89.7

0.89

0.6

87.8

22.3

Minor 5ss

30.8

-2.2

2.6

33.6

35.6

Minor BPS

45.5

-0.3

53.22

Associated Gene:

Gene:

G6PC

Ensembl Gene ID:

ENSAPLG00000017120

Chromosome:

PEDO01001475.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037211

21 - 2880

2860