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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001479.1_1293_1363_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1293 - 1363

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

GTTTCTTTCGTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTGTGAC

U12 Branch Point Sequence:

GTGGGTGTGACT

Flanking Amino Acid:

VSGSQLHHMEPLSGDAAFPL

Intron Amino Acid Position:

154

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

53.6

0.09

1.4

48.8

46.3

Major PPT

80.7

0.69

0.8

31.6

Minor 5ss

26.2

-2.7

2.9

30.6

42.9

Minor BPS

41.2

-0.6

2.4

58.64

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024724

Chromosome:

PEDO01001479.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024322

21 - 5353

5333