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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001479.1_1754_1843_F


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
1754 - 1843

Intron Length:
90

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CGG|GTAGGTACC

5'SS Class:
major

3'SS Sequence:
TCTCTGCCCCCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GCCTGAC

U12 Branch Point Sequence:
GGGGCCTGACCG

Flanking Amino Acid:
FTAALWPEVRSHMVQHASLR

Intron Amino Acid Position:
284

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.1
0.64
1.1
70.2
38.5

Major BPS
51.1
0.03
1.2
45
39.9

Major PPT
74.3
0.55
0.8
65.5
36.1

Minor 5ss
35.2
-1.7
2.9
38
39.8

Minor BPS
44.8
-0.5
1.9
45.67
46.2

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
PEDO01001479.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21 - 5353
5333