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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001479.1_1987_2340_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1987 - 2340

Intron Length:

354

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGGGTGAA

5'SS Class:

strong_major

3'SS Sequence:

CCTTTCTCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGACAAA

U12 Branch Point Sequence:

TGCCCGTGACAA

Flanking Amino Acid:

KPFSCQICGQRFNRNGHLKF

Intron Amino Acid Position:

331

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

73.7

32.5

Major BPS

46.4

-0.2

1.3

51.1

Major PPT

81.6

0.71

0.7

77.1

24.9

Minor 5ss

25.2

-2.9

3.2

30.3

43.5

Minor BPS

38.4

-0.8

2.2

47.75

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024724

Chromosome:

PEDO01001479.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024322

21 - 5353

5333