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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001479.1_3114_3223_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3114 - 3223

Intron Length:

110

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGTCGT

5'SS Class:

strong_major

3'SS Sequence:

CACTGCCTGACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CACTCAG

U12 Branch Point Sequence:

ACTGCCTGACAG

Flanking Amino Acid:

VAQEQSITSQEEATYIQEIT

Intron Amino Acid Position:

413

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.2

0.95

0.8

77.8

38.7

Major BPS

50.8

0.02

1.5

37.5

Major PPT

63.1

0.3

56.9

38.5

Minor 5ss

30.5

-2.2

2.9

41.4

Minor BPS

44.1

-0.5

1.9

47.65

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024724

Chromosome:

PEDO01001479.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024322

21 - 5353

5333