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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001479.1_3302_3498_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3302 - 3498

Intron Length:

197

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGGG

5'SS Class:

strong_major

3'SS Sequence:

CCTGTGCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

TGGTTCTGAACC

Flanking Amino Acid:

VQHLVTSDNQVQYIIAQDGV

Intron Amino Acid Position:

439

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.7

0.77

0.9

63.9

42.4

Major BPS

82.1

0.8

71.6

36.4

Major PPT

75.9

0.58

0.9

68.6

37.3

Minor 5ss

23.2

-3.1

3.2

28.7

43.7

Minor BPS

66.6

0.5

1.4

71.78

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024724

Chromosome:

PEDO01001479.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024322

21 - 5353

5333