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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001479.1_3827_4013_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

3827 - 4013

Intron Length:

187

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGCAG

5'SS Class:

strong_major

3'SS Sequence:

CTCCTCCCTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTGCAG

U12 Branch Point Sequence:

CAGTCCTGGACT

Flanking Amino Acid:

QGSQFLQEPQIQYMPVSPEQ

Intron Amino Acid Position:

489

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.3

0.88

0.9

69.6

42.7

Major BPS

44.4

-0.3

1.8

57.1

49.4

Major PPT

79.2

0.66

0.7

73.1

25.2

Minor 5ss

30.1

-2.3

3.2

37.6

47.1

Minor BPS

62.3

0.47

1.6

72.76

44.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024724

Chromosome:

PEDO01001479.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024322

21 - 5353

5333