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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001508.1_2274_3006_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2274 - 3006

Intron Length:

733

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTGAGTGCC

5'SS Class:

strong_major

3'SS Sequence:

TGCTCGCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GCCTCAG

U12 Branch Point Sequence:

CTGGCCTCAGCC

Flanking Amino Acid:

LQLKMEDGEFWMSFRDFMRE

Intron Amino Acid Position:

112

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.9

0.78

0.9

71.1

32.7

Major BPS

46.3

-0.2

1.6

53.3

44.2

Major PPT

68.7

0.42

0.9

61.7

34.9

Minor 5ss

28.6

-2.4

32.8

35.9

Minor BPS

47.9

-0.1

1.9

58.23

46.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005185

Chromosome:

PEDO01001508.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046824

186 - 4387

4202

ENSAPLT00000042709

53 - 4287

4235

ENSAPLT00000023525

21 - 4577

4557