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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001508.1_3418_3695_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3418 - 3695

Intron Length:

278

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACCCCC

5'SS Class:

major

3'SS Sequence:

CCCCCAGGCCCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCCCAC

U12 Branch Point Sequence:

TTGCCCACGAGC

Flanking Amino Acid:

MHTIGFAVYEGSQNVHLKKD

Intron Amino Acid Position:

394

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.5

0.55

1.2

60.6

44.5

Major BPS

48.9

-0

1.3

58.1

40.4

Major PPT

54.8

0.11

45.1

35.4

Minor 5ss

44.7

-0.6

2.9

60.8

43.7

Minor BPS

43.4

-0.5

2.1

56.72

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005185

Chromosome:

PEDO01001508.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046824

186 - 4387

4202