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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001508.1_908_991_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

908 - 991

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTGAGTCCC

5'SS Class:

major

3'SS Sequence:

GCCCCGCGCTCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTCTCAC

U12 Branch Point Sequence:

ATCGCCTCACGT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.4

0.69

0.9

68.6

36.4

Major BPS

72.7

0.56

30.1

Major PPT

57.2

0.16

52.9

36.7

Minor 5ss

31.8

-2.1

2.8

37.4

33.2

Minor BPS

44.4

-0.3

2.1

61.92

47.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000005185

Chromosome:

PEDO01001508.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046824

186 - 4387

4202

ENSAPLT00000042709

53 - 4287

4235

ENSAPLT00000023525

21 - 4577

4557