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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001548.1_10842_11696_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

10842 - 11696

Intron Length:

855

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCCAAAAG

5'SS Class:

weak_major

3'SS Sequence:

TTCTCTTTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

ACATTTTTATTT

Flanking Amino Acid:

WATWMISADPDLSGLSQTFT

Intron Amino Acid Position:

421

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.4

0.17

1.3

Major BPS

96.5

1.15

0.6

34.2

Major PPT

90.9

0.92

0.6

84.1

30.9

Minor 5ss

26.5

-2.7

2.9

31.4

42.4

Minor BPS

53.9

0.2

1.5

65.97

39.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022634

Chromosome:

PEDO01001548.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000036349

9121 - 14612

5492

ENSAPLT00000017429

8296 - 14612

6317