Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001548.1_17780_18188_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

17780 - 18188

Intron Length:

409

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTGAGTGTA

5'SS Class:

strong_major

3'SS Sequence:

CTCTTCAACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TCCTCTTCAACA

Flanking Amino Acid:

TNFSGRSDKLRMKIVKEKAL

Intron Amino Acid Position:

700

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

93.2

1.02

0.7

86.6

22.2

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

70.9

0.47

0.9

65.5

33.8

Minor 5ss

30.8

-2.2

3.2

39.9

46.1

Minor BPS

65.5

0.48

1.6

71.01

41.7

Associated Gene:

Gene:

UNC45B

Ensembl Gene ID:

ENSAPLG00000007713

Chromosome:

PEDO01001548.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008034

16238 - 32716

16479