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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001548.1_18961_19243_R


Intron Information:

Intron Rank:
12

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
18961 - 19243

Intron Length:
283

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGCCTGCC

5'SS Class:
major

3'SS Sequence:
CTGTGCTTTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTTTCAC

U12 Branch Point Sequence:
TTTCACTGAGCG

Flanking Amino Acid:
LTDQSKELIARVFLALCEDP

Intron Amino Acid Position:
601

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
67.5
0.41
1.2
60.4
39.1

Major BPS
72.3
0.55
1.2
77.4
37.4

Major PPT
79.2
0.66
0.9
72.8
37.5

Minor 5ss
33
-1.9
3.3
44.7
43.3

Minor BPS
49.1
-0.2
2
63.51
43.5

Associated Gene:

Gene:
UNC45B

Ensembl Gene ID:

Chromosome:
PEDO01001548.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

16238 - 32716
16479