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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001548.1_23681_24209_R


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
23681 - 24209

Intron Length:
529

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAA|GTGAGTCGG

5'SS Class:
major

3'SS Sequence:
CTGTCCCATGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCTGAC

U12 Branch Point Sequence:
ATGTGCTGACTC

Flanking Amino Acid:
NYRVICEEYIKSKIDPQNMD

Intron Amino Acid Position:
385

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
77.6
0.65
1
62.5
43.8

Major BPS
66.3
0.4
1.1
57
41.8

Major PPT
72.5
0.51
0.9
66.4
34.7

Minor 5ss
29.9
-2.3
2.8
32.6
35.8

Minor BPS
45.5
-0.3
2.1
57.14
42

Associated Gene:

Gene:
UNC45B

Ensembl Gene ID:

Chromosome:
PEDO01001548.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

16238 - 32716
16479