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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001548.1_25376_25537_R


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
25376 - 25537

Intron Length:
162

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAG|GTAATGTGC

5'SS Class:
major

3'SS Sequence:
CTTGCTTCTGTAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCCTAAC

U12 Branch Point Sequence:
CTTCTCCTAACT

Flanking Amino Acid:
QHGKEEALVLDTKKDLRMIT

Intron Amino Acid Position:
271

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
78.5
0.67
1
66.7
39.8

Major BPS
72
0.55
1
71.8
31.4

Major PPT
78.4
0.64
0.8
73.5
31.5

Minor 5ss
37.1
-1.5
3.3
50.7
45.8

Minor BPS
64
0.52
1.7
81.84
39.4

Associated Gene:

Gene:
UNC45B

Ensembl Gene ID:

Chromosome:
PEDO01001548.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

16238 - 32716
16479