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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001548.1_26798_27057_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
26798 - 27057

Intron Length:
260

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTGAGAAGC

5'SS Class:
strong_major

3'SS Sequence:
CTCCCCCCACCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGCTAAC

U12 Branch Point Sequence:
CTCCCCCCACCA

Flanking Amino Acid:
ENSEKEKREKAANNLIVLGR

Intron Amino Acid Position:
159

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
86.6
0.86
0.8
75
35.2

Major BPS
69.4
0.48
1.1
69.6
35.5

Major PPT
67.1
0.39
0.9
59
31.4

Minor 5ss
28.4
-2.5
2.8
34.6
41.3

Minor BPS
42.6
-0.5
2.1
53.63
44.5

Associated Gene:

Gene:
UNC45B

Ensembl Gene ID:

Chromosome:
PEDO01001548.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

16238 - 32716
16479