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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001633.1_266670_268259_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

266670 - 268259

Intron Length:

1590

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTTTCTGCC

5'SS Class:

weak_major

3'SS Sequence:

CAGGGTGTCACAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TGCTCAG

U12 Branch Point Sequence:

CTCTGCTCAGCC

Flanking Amino Acid:

CLDAGLPGLLRGLWGLMLLL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.2

0.08

1.3

50.6

38.6

Major BPS

55.8

0.14

1.6

65.3

43.7

Major PPT

57.5

0.17

1.1

48.7

43.6

Minor 5ss

42.1

-0.9

2.8

51.3

39.7

Minor BPS

45.7

-0.3

2.2

58.11

46.7

Associated Gene:

Gene:

SLC35A4

Ensembl Gene ID:

ENSAPLG00000014626

Chromosome:

PEDO01001633.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015238

266583 - 269168

2586