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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001633.1_267407_267480_F

Intron Information:

Intron Rank:

108478

Intron Class:

major

Intron Phase:

Intron Coordinates:

267407 - 267480

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAGG

5'SS Class:

strong_major

3'SS Sequence:

TCTGTCCCCGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCTCAC

U12 Branch Point Sequence:

CGTCCCGCAACC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.5

0.91

0.9

73.4

43.3

Major BPS

63.6

0.34

65.3

32.1

Major PPT

75.7

0.58

0.8

69.7

31.1

Minor 5ss

31.7

-2.1

3.1

39.7

45.9

Minor BPS

47.1

-0.2

2.2

61.01

43.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000014629

Chromosome:

PEDO01001633.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015240

267222 - 267678

457