Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001633.1_295988_296438_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

295988 - 296438

Intron Length:

451

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAC|GTAAGGAGG

5'SS Class:

major

3'SS Sequence:

TGCTCTTACACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTTAC

U12 Branch Point Sequence:

TTGCTCTTACAC

Flanking Amino Acid:

SNSYAECYPATMDDMAVDSD

Intron Amino Acid Position:

129

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.7

0.51

1.3

64.3

47.1

Major BPS

69.2

0.48

37.1

Major PPT

73.3

0.53

0.9

68.4

36.5

Minor 5ss

-1.9

3.1

39.9

Minor BPS

52.6

0.06

1.7

64.53

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020748

Chromosome:

PEDO01001633.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000044992

294492 - 296532

2041