Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001633.1_298368_298451_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

298368 - 298451

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGCGGG

5'SS Class:

strong_major

3'SS Sequence:

GCCCCCTCCCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCCTCAC

U12 Branch Point Sequence:

GGGTCCTCACCG

Flanking Amino Acid:

MAAAAEEEEEPPAAPRLRD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.2

0.76

0.9

63.1

43.4

Major BPS

72.4

0.56

73.5

32.5

Major PPT

66.8

0.38

0.8

57.1

33.4

Minor 5ss

30.3

-2.3

3.3

37.8

47.1

Minor BPS

48.5

-0.2

1.9

53.33

46.8

Associated Gene:

Gene:

WDR55

Ensembl Gene ID:

ENSAPLG00000013532

Chromosome:

PEDO01001633.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042796

298341 - 300314

1974