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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001633.1_328991_330504_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

328991 - 330504

Intron Length:

1514

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTATGCGGG

5'SS Class:

major

3'SS Sequence:

GTTCCTTTCTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

TGTTAATGCACT

Flanking Amino Acid:

MICDNALTKNLDFRRKW

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.1

52.4

44.6

Major BPS

84.4

0.85

34.5

Major PPT

82.3

0.73

0.8

80.3

31.6

Minor 5ss

-0.9

3.2

52.2

46.9

Minor BPS

45.6

-0.2

2.3

72.41

43.5

Associated Gene:

Gene:

ZMAT2

Ensembl Gene ID:

ENSAPLG00000016678

Chromosome:

PEDO01001633.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046455

328095 - 337255

9161