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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001654.1_72_1808_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
72 - 1808

Intron Length:
1737

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTTACTCCT

5'SS Class:
major

3'SS Sequence:
TGCTTCCCCCCAG|T

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTCAG

U12 Branch Point Sequence:
CCCTTCTCAGCA

Flanking Amino Acid:
RSEVGEAKAQSRNSGQQGDM

Intron Amino Acid Position:
15

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.4
0.46
1.3
67.4
43.6

Major BPS
71
0.52
1.5
79.6
35.6

Major PPT
74.6
0.55
0.8
66
35.9

Minor 5ss
38.8
-1.3
2.8
52.5
43.9

Minor BPS
47.5
-0.1
1.8
54.44
44.7

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
PEDO01001654.1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

30 - 2024
1995