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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001683.1_13404_15536_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

13404 - 15536

Intron Length:

2133

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGT|GCGTGTGCC

5'SS Class:

weak_major

3'SS Sequence:

GTGGTTACACAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TATTCATGAACT

Flanking Amino Acid:

TAYCYNTEGGVQNN*

Intron Amino Acid Position:

222

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.3

0.03

1.4

62.4

37.7

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

49.9

-0

1.2

47.5

44.1

Minor 5ss

26.3

-2.7

35.7

41.2

Minor BPS

69.8

0.7

1.7

88.11

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000030276

Chromosome:

PEDO01001683.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019172

13389 - 20754

7366