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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001693.1_168_738_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

168 - 738

Intron Length:

571

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGG|GCTTGGGGG

5'SS Class:

weak_major

3'SS Sequence:

GCCGCCCCGTCAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

GGCGGAG

U12 Branch Point Sequence:

GGCGGCGGAGGA

Flanking Amino Acid:

MGMRLSTQAYC

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.7

0.18

1.4

48.9

44.8

Major BPS

-1

1.6

22.5

37.3

Major PPT

57.6

0.17

54.2

36.6

Minor 5ss

20.3

-3.4

3.9

37.7

Minor BPS

26.6

-1.7

2.1

28.92

36.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000029328

Chromosome:

PEDO01001693.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047537

163 - 1139

977