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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001708.1_2275_3161_F

Intron Information:

Intron Rank:

129532

Intron Class:

major

Intron Phase:

Intron Coordinates:

2275 - 3161

Intron Length:

887

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGCTG

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCCTGCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAGACAC

U12 Branch Point Sequence:

TAGACACTAAGC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.2

0.81

0.9

69.5

42.7

Major BPS

49.9

-0

1.2

58.7

38.1

Major PPT

76.4

0.59

41.4

Minor 5ss

28.9

-2.4

3.3

37.6

47.1

Minor BPS

43.4

-0.5

2.1

54.58

42.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019712

Chromosome:

PEDO01001708.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041752

2230 - 5304

3075

ENSAPLT00000021124

21 - 5304

5284

ENSAPLT00000017945

21 - 5304

5284