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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001708.1_3786_3994_F

Intron Information:

Intron Rank:

129549

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

3786 - 3994

Intron Length:

209

Sequence Information:

Terminal Dinucleotides:

GT-AT

5'SS Sequence:

AAG|GTGAGCATC

5'SS Class:

strong_major

3'SS Sequence:

GTGCGTTTCTCAT|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ACATGAT

U12 Branch Point Sequence:

AAAGCCTGACCC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.4

0.88

0.8

81.3

32.8

Major BPS

63.3

0.33

1.1

53.7

41.6

Major PPT

-0.5

3.2

44.6

Minor 5ss

38.5

-1.3

51.2

45.7

Minor BPS

47.6

-0.2

1.8

55.99

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000019712

Chromosome:

PEDO01001708.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041752

2230 - 5304

3075