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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001732.1_718_1166_F

Intron Information:

Intron Rank:

136367

Intron Class:

minor-like

Intron Phase:

Intron Coordinates:

718 - 1166

Intron Length:

449

Sequence Information:

Terminal Dinucleotides:

AT-AA

5'SS Sequence:

CAA|ATCTCCTGC

5'SS Class:

weak_minor

3'SS Sequence:

AAAATGGCCCCAA|A

3'SS Class:

degenerate_minor

U2 Branch Point Sequence:

AAAACAC

U12 Branch Point Sequence:

ATGCCCCAAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

27.3

-1.4

3.3

32.3

37.9

Major BPS

47.8

-0.1

53.1

30.9

Major PPT

33.1

-0.9

3.1

32.1

41.2

Minor 5ss

52.6

0.09

76.9

Minor BPS

46.2

-0.2

2.1

66.2

43.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023483

Chromosome:

PEDO01001732.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022784

21 - 1312

1292