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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001732.1_843_1006_F

Intron Information:

Intron Rank:

136365

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

843 - 1006

Intron Length:

164

Sequence Information:

Terminal Dinucleotides:

GT-AT

5'SS Sequence:

CAT|GTCTGCGGG

5'SS Class:

weak_major

3'SS Sequence:

TGTCCCGCCGCAT|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCCAAAT

U12 Branch Point Sequence:

AAACCCCAAATC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.5

0.04

1.4

43.6

44.1

Major BPS

52.4

0.06

1.1

58.8

34.5

Major PPT

39.6

-0.6

3.1

54.1

36.5

Minor 5ss

39.7

-1.2

3.2

45.9

Minor BPS

45.4

-0.3

1.9

53.5

37.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023483

Chromosome:

PEDO01001732.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000018099

21 - 1312

1292