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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001811.1_1302_2196_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1302 - 2196

Intron Length:

895

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAT|GTGGCTGAA

5'SS Class:

weak_major

3'SS Sequence:

TGGTTGCATGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTTGCAT

U12 Branch Point Sequence:

AAGCCGTAGATT

Flanking Amino Acid:

KQFLHRDLVGIQVKLGNQDG

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.6

0.16

1.2

57.6

37.4

Major BPS

57.3

0.18

1.6

71.4

45.1

Major PPT

69.2

0.43

1.1

62.7

43.4

Minor 5ss

33.1

-1.9

3.5

42.9

45.1

Minor BPS

41.6

-0.5

2.2

55.07

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017469

Chromosome:

PEDO01001811.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027969

1156 - 2798

1643