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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001811.1_226_3092_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

226 - 3092

Intron Length:

2867

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

CTG|GCCTGGGCT

5'SS Class:

major

3'SS Sequence:

GAGGCGCCGGGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CATGGAG

U12 Branch Point Sequence:

ACCACGCGAAGG

Flanking Amino Acid:

QHRKSAPSTAGGGLGGADPQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.1

0.33

1.2

64.9

37.8

Major BPS

41.1

-0.5

1.6

38.4

41.7

Major PPT

40.5

-0.5

1.6

37.2

Minor 5ss

23.2

-3.1

4.2

35.7

43.2

Minor BPS

32.1

-1.4

2.3

31.67

40.6

Associated Gene:

Gene:

TIMM8A

Ensembl Gene ID:

ENSAPLG00000019380

Chromosome:

PEDO01001811.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024072

195 - 3572

3378