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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001811.1_2644_2726_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

2644 - 2726

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGAGGTTA

5'SS Class:

strong_major

3'SS Sequence:

TGTCGCCCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACCCCAC

U12 Branch Point Sequence:

CACCCCACAGCT

Flanking Amino Acid:

YAIMYSCWHEKAEERPTFTA

Intron Amino Acid Position:

160

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.6

0.89

0.8

80.9

28.8

Major BPS

46.4

-0.2

1.2

52.1

34.1

Major PPT

69.4

0.44

0.9

61.6

Minor 5ss

34.9

-1.7

3.4

46.2

49.1

Minor BPS

42.3

-0.5

56.21

45.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000017469

Chromosome:

PEDO01001811.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027969

1156 - 2798

1643