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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001830.1_44411_44586_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

44411 - 44586

Intron Length:

176

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGACTC

5'SS Class:

strong_major

3'SS Sequence:

TTGTGGGTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTGAA

U12 Branch Point Sequence:

TTCTTTGTGCCT

Flanking Amino Acid:

VAYWPGRITPGVTHELASTL

Intron Amino Acid Position:

243

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.5

0.86

0.8

35.2

Major BPS

78.4

0.71

0.9

69.4

37.7

Major PPT

62.6

0.28

1.2

57.5

47.4

Minor 5ss

31.1

-2.2

3.2

41.7

Minor BPS

37.9

-0.8

3.7

69.33

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020610

Chromosome:

PEDO01001830.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021389

42359 - 46837

4479