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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001830.1_8657_9409_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

8657 - 9409

Intron Length:

753

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACAGTT

5'SS Class:

major

3'SS Sequence:

TCTCTCTCCTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTCAT

U12 Branch Point Sequence:

TGTCAAGGAGCT

Flanking Amino Acid:

FGTEQDRMDKCAMGHEYVAD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.7

1.1

78.9

35.3

Major BPS

70.9

0.52

1.1

71.4

36.6

Major PPT

78.2

0.63

0.7

77.3

24.7

Minor 5ss

41.9

-0.9

3.5

64.8

46.5

Minor BPS

35.8

-1

2.3

58.07

43.7

Associated Gene:

Gene:

HCLS1

Ensembl Gene ID:

ENSAPLG00000009127

Chromosome:

PEDO01001830.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019842

5824 - 17638

11815

ENSAPLT00000009529

5824 - 18276

12453

ENSAPLT00000025900

5824 - 18276

12453