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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001860.1_11689_13028_F

Intron Information:

Intron Rank:

135011

Intron Class:

major

Intron Phase:

Intron Coordinates:

11689 - 13028

Intron Length:

1340

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAATAATT

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAG

U12 Branch Point Sequence:

TTTAGTATAACT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.7

0.82

0.9

86.5

28.6

Major BPS

72.5

0.56

1.5

71.7

44.6

Major PPT

100

1.12

0.4

100

Minor 5ss

39.5

-1.2

3.1

58.2

Minor BPS

55.4

0.25

2.1

81.56

39.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022631

Chromosome:

PEDO01001860.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026842

11563 - 14017

2455