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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001924.1_1034_1103_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1034 - 1103

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTACCCGGT

5'SS Class:

weak_major

3'SS Sequence:

CCCTGTCTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTCAC

U12 Branch Point Sequence:

GTCCCCACACCC

Flanking Amino Acid:

PNAVGIIIAHGSVGGAISVM

Intron Amino Acid Position:

356

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

56.4

0.15

1.3

49.5

47.2

Major BPS

57.5

0.19

1.1

60.7

37.6

Major PPT

68.6

0.42

64.2

36.7

Minor 5ss

-0.8

3.6

63.9

47.6

Minor BPS

43.2

-0.5

54.21

43.2

Associated Gene:

Gene:

SORT1

Ensembl Gene ID:

ENSAPLG00000021432

Chromosome:

PEDO01001924.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021449

21 - 3965

3945

ENSAPLT00000019877

21 - 3965

3945