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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001924.1_128_240_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

128 - 240

Intron Length:

113

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAGCCCCC

5'SS Class:

weak_major

3'SS Sequence:

CCCCTGCCCGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGCTGAG

U12 Branch Point Sequence:

GGACGCTGAGCT

Flanking Amino Acid:

VCPCTLQDFLCDFGYYRPEN

Intron Amino Acid Position:

539

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.7

0.14

1.3

44.8

41.4

Major BPS

-0.2

1.6

40.4

42.3

Major PPT

67.4

0.39

0.8

60.5

29.4

Minor 5ss

43.4

-0.7

3.2

57.1

42.6

Minor BPS

43.1

-0.4

57.56

Associated Gene:

Gene:

SORT1

Ensembl Gene ID:

ENSAPLG00000021432

Chromosome:

PEDO01001924.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021449

21 - 3965

3945

ENSAPLT00000019877

21 - 3965

3945