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Intron Name: Anas_platyrhynchos_platyrhynchos_PEDO01001924.1_1649_1771_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1649 - 1771

Intron Length:

123

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGGATG

5'SS Class:

strong_major

3'SS Sequence:

CTGCTCCCACCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGCCAT

U12 Branch Point Sequence:

TCTGCTCCCACC

Flanking Amino Acid:

GIYITSVLSEDNSIQSVITF

Intron Amino Acid Position:

286

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.8

78.6

37.3

Major BPS

49.9

-0

1.4

61.8

44.5

Major PPT

67.3

0.39

0.9

59.5

36.9

Minor 5ss

30.4

-2.2

3.2

38.7

46.6

Minor BPS

41.4

-0.6

2.2

54.53

43.9

Associated Gene:

Gene:

SORT1

Ensembl Gene ID:

ENSAPLG00000021432

Chromosome:

PEDO01001924.1

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000021449

21 - 3965

3945

ENSAPLT00000019877

21 - 3965

3945